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Glossary


EVISA is providing a list of terms used in the area of speciation and fractionation analysis. Since speciation analysis is a field of analytical chemistry that is specified by a pronounced interdisciplinary cooperation between different sciences such as biochemistry, medicine, biology, environmental sciences, nutritional sciences and material sciences its terminology is a complex mixture of terms used in all these.

You may search for a term or browse the glossary alphabetically.

(In case that you cannot find the term you may consult more special glossaries or handbooks about nomenclature. For more details please consult EVISA's List of Glossaries)





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t-test
 Often called Student’s t-test. A statistical test of significance in which the difference between two mean values is tested. The null hypothesis is that there is no difference between the two means. The test is carried out by calculating a t-value, then comparing the calculated t-value with a critical t-value which is obtained from a statistics table. If the calculated t-value is greater than the critical t-value, the null hypothesis is rejected; this means that a statistically significant or real difference exists between the mean values being compared. If the calculated t-value is less than the critical t-value, the null hypothesis stands, therefore no difference has been observed between the two mean values.

tandem mass spectrometer (MS/MS)
An arrangement in which ions are subjected to two or more sequential stages of analysis (which may be separated spatially or temporally) according to the quotient mass- charge. Inbetween analysers, gas phase reactions may be initiated, aiding in the interpretation of fragmentation patterns.

tandem mass spectrometry
Tandem Mass Spectrometry, usually referred to as MS/MS, involves the use of 2 or more mass analyzers. It is often used to analyze individual components in a mixture. This technique adds specificity to a given analysis. 
The basic idea of MS/MS is a selection of a m/z of a given ion formed in the ion source, and subject this ion to fragmentation, usually by collision with inert gas (eg. Argon). The product ions are then detected. This is a powerful way of confirming the identity of certain compounds and determining the structure of unknown species. So MS/MS is a process that involves 3 steps: ionization-mass selection-mass analysis.

MS/MS could be performed on instruments such as triple quadrupole (QQQ), ion trap, time of flight, fourier transform, etc... The triple quadrupole is the most frequently used mass spectrometer for MS/MS, perhaps because of the cost and ease of use among other factors.


tandem MS
The tandem MS is an instrumental arrangement in which ions are subjected to two or more sequential stages (which may be separated spatially or temporally) of analysis according to the mass-to-charge ratio. The study of ions by means of two stages of mass analysis is termed mass spectrometry/mass spectrometry (MS/MS)

tangential flow filtration
A separation technique that transfers components of one system (stream) into another. The stream thge product is being extracted from acrosses the stream that the product is being transferred to multiple times.

target value (TV)
Used in proficiency testing to designate the correct value, usually estimated by the mean of all participant responses, after removal of outliers, or by the mean established by definitive or reference methods.

Taylor cone
A Taylor cone refers to the conical shape of the liquid emanating from a capillary under high voltage such as in electrospray or other electrohydrodynamic spray proces.

TEL
Tetraethyllead (common name tetraethyl lead), abbreviated TEL, is an organolead compound with the formula (CH3CH2)4Pb. Once a common antiknock additive/octane booster in gasoline (petrol), TEL usage was largely discontinued because of the toxicity of lead and its deleterious effect on catalytic converters. It is still used as an additive in aviation fuel for piston engine-powered aircraft.

temperature-programmed chromatography
A procedure in which the temperature of the column is changed systematically during a part or the whole of the separation.

Source: IUPAC

teratogen
an agent capable of causing abnormalities in a developing foetus; that is, causing birth defects

tertiary structure
The three-dimensional folding (its normal state) of a polypeptide chain in a protein molecule.

tetramethylammonium hydroxide
Tetramethylammonium hydroxide (TMH) is an effective etchant and chelating agent ideal for removing residue and contaminants from semiconductor and electronic components. It also is often used to solubilze biological materials by alkaline hydrolysis.
 
Molecular formula: C4H13NO.5H2
MW: 181.22972 

thermal ionization
Ionization of particles brought about by a high temperature—for example, emission of ions from an adsorbed layer on an incandescent metal surface.

Source: IUPAC

thermolysis
An uncatalysed bond cleavage resulting from exposure of a compound to a raised temperature.

thermospray ionization
Thermospray ionization is a method of ion formation in which a liquid is flowed through a heated capillary to produce a spray of droplets and solvent vapor. Ions are formed due to the statistical imbalance of charges in the droplets or by a heated filamen.

thermospray nebulization
Thermospray nebulization is a method of aerosol formation in which a liquid is flowed through a heated capillary to produce a spray of droplets and solvent vapor.

Thimerfonat
Thimerfonat (Timerfonat) is an organic mercury compound used since the 1930's as a preservative for some vaccines.

Other names for Timerfonat:
  • Ethyl-(4-sulfophenyl) sulfanylquecksilber
  • Natriumtimerfonat (Na-Salz)
  • Natriumthimerfonat (Na-Salz)

Formula: C8H10HgO3S2
CAS Number: 33305-56-5 (5964-24-9 Na salt)

Thimerosal
Thimerosal is an organometallic compound containing mercury, commonly used as a preservative. It is found in cosmetics, including makeup removers, eye moisturizers, and mascaras. Some other places in which Thimerosal may be found include: soap-free cleansers; nose, eye, and ear drops; eye ointments; topical medications; and antiseptic sprays. It is also found in cleaning fluids that are used for contact lenses. Thimerosal is also used widely as a preservative in antitoxins, tuberculin tests, desensitization solutions and vaccines, most controversially including those widely administered to children. Its chemical formula is C9H9HgNaO2S. It has been in use since the 1930s.

Other names for thimerosal:
Thimerosol, Merthiolate, Sodium ethylmercurithiosalicylate, Mercurothiolate, Thiomersal, Thiomersalate, Thiomersalan, Ethyl (2-mercaptobenzoato-S) mercury sodium salt, [(o-carboxyphenyl)thio] Ethylmercury sodium salt


thin-layer chromatography (TLC)
Liquid chromatography carried out in a layer of adsorbent spread on a support, e.g. a glass plate.

thio-arsenosugar-glycerol
Thio-arsenosugar-glycerol has been found in mussel samples.

thio-arsenosugar-phosphate
Thio-arsenosugar-phosphate has been found in mussel samples.

thio-arsenosugar-sulfate
Thio-arsenosugar-sulfate has been identified as a constituent of aqueous and methanol extracts from  the gonad and the muscle of the great scallop.

thio-arsenosugar-sulfonate
Thio-arsenosugar-sulfonate has been identified as a constituent in aqueous and methanol extracts from the gonad and the muscle of the great scallop.

thioarsenate
An aqueous species, such as H2AsO3S and H2AsS2O2−, that contains pentavalent arsenic and sulfide (compare with arsenate, thioarsenic, thioarsenite, and methylthioarsenate).

thioarsenic
An aqueous species, such as HAs3S62− and H2AsO3S, that contains sulfide and arsenic, either as arsenide (As3−), As3+, or As5+ (compare with arsenosulfide, methylthioarsenate, thioarsenate, and thioarsenite).

thioarsenite
An aqueous species, such as H2As3S6, that contains trivalent arsenic and sulfide (compare with arsenite, thioarsenic, thioarsenate, and methylthioarsenate).

thiol
An organic compound or chemical species containing a sulfhydryl (–SH) group. Methanethiol (CH3SH) is an example of a thiol.

thioredoxin reductase
A protein containing a Se-Cysteine residue that regulates intracellular redox reactions (including reduction of thioredoxin) and factors into repair mechanisms in DNA synthesis.

thyroxine
The major form of thyroid hormone in the blood is thyroxine (T4, see left). This prohormone is converted to the active T3 within cells by deiodinases. Thyroxine (3,5,3',5'-tetra­iodothyronine) is produced by follicular cells of the thyroid gland by attaching four iodine atoms to the ring structures of tyrosine molecules

time gating
Observing only a portion of a datastream by selecting time intervals, subsets of the overall datastream, for recording.

time-of-flight mass spectrometer (TOF-MS)
The TOF MS exploits the fact that ions of different mass-charge need different times to travel through a certain distance in a field- free region after they have all been initially given the same kinetic energy or same impulse.

tin
Tin is a chemical element in the periodic table that has the symbol Sn (Latin: stannum) and atomic number 50. This silvery, malleable poor metal that is not easily oxidized in air and resists corrosion is found in many alloys and is used to coat other metals to prevent corrosion. Tin is obtained chiefly from the mineral cassiterite, where it occurs as an oxide. It is the classic alloying metal to make bronze.

Elemental tin is an essential nutrient, needed in very small amounts. However, certain organic tin compounds, organotin, such as triorganotins (see tributyltin oxide) are toxic and are used as industrial fungicides and bactericides.

titer
A measured sample. (To draw a measured, representative sample from a larger amount is to titrate)

tolerable daily intake
A TDI is an estimate of the amount of a substance in air, food or drinking water that can be taken in daily over a lifetime without appreciable health risk. TDIs are calculated on the basis of laboratory toxicity data to which uncertainty factors are applied. TDIs are used for substances that do not have a reason to be found in food (as opposed to substances that do, such as additives, pesticide residues or veterinary drugs in foods- see also Acceptable Daily Intake : ADI).

top-down proteomics
Top-down proteomics is a method of protein identification that uses the m/z selection of intact proteins followed by fragmentation and m/z separation in a second stage of mass spectrometry. Mixtures of proteins must first be separated by liquid chromatography or other separation method prior to mass spectrometry.

total atmospheric mercury (TAM)
Total atmospheric mercury (TAM) is operationally defined as the sum of gaseous elemental mercury (GEM), gaseous oxidized inorganic mercury (GOIM), which is also called reactive gaseous mercury (RGM), and total filterable mercury (TFM).

total dissolved phosphorus (TDP)
Phosphorus form present in water that had been filtered through 0.45 µm membrane* then subjected to oxidative digestion process (APHA, 1989). Includes both dissolved organic and inorganic P.

total gaseous mercury (TGM)
TGM is a mercury fraction operationally defined as species passing through a 0.45 µm filter or some other simple filtration device such as quartz wool plugs, and which are collected on gold or other collection material. TGM is mainly composed of elemental mercury vapor with minor fractions of other volatile species such as HgCl2, CH3HgCl or (CH3)2Hg.

total ion chromatogram (TIC)
A total ion chromatogram is a plot of the total ion signal in each of a series of mass spectra that are recorded as a function of chromatographic retention time. Care should be taken to avoid confusion between the abbreviations for total ion current and total ion chromatogram.

total ion profile
The total ion profile is a plot of the total ion signal from a series of mass spectra that are recorded as a function of time, for example chromatogram, electropherogram, flow injection analysis, or other time-dependent samplin.

total mercury
Includes all forms of mercury

total particulate mercury (TPM)
TPM consiusts of mercury bound or adsorbed to atmospheric particulate matter. Several different components are possible: Hg° or RGM adsorbed to the particle surface, or divalent mercury species chemically bound to the particle or integrated into the particle itself.

total phosphorus (TP)
Sum of organic and inorganic forms of phosphorus. TP is measured on unfiltered water samples that has been subjected to oxidative destruction of organic matter (APHA, 1989)..

total-ion current
The total-ion current (TIC) trace is the sum of the relative abundances of all the ions in each mass spectrum plotted against the time (or number of scans) in a data collection sequence. For example, the total-ion current trace in a GC/MS run is analogous to the output of a single-channel gas chromatography detector. The trace allows eluted peaks to be identified by an increase in the total-ion current over background. The scans corresponding to the eluted peak are averaged together to create the mass spectrum of the sample corresponding to  that peak. 

toxic substance
Substance causing injury to living organisms as a result of physicochemical interactions.

toxicant
This is the preferred term for a substance that is considered to be toxic under circumstances which are thought likely to happen.

toxicogenomics
Toxicogenomics combines toxicology, genetics, molecular biology, and environmental health to elucidate the response of living organisms to stressful environments or toxic agents. Likewise, new drug candidates can be screened through a combination of gene expression profiling and toxicology to understand gene response and possibly predict safety.

toxicokinetics
Toxicokinetics is the process of the uptake of potentially toxic substances by the body, the biotransformation they undergo, the distribution of the substances and their metabolites in the tissues, and the elimination of the substances and their metabolites from the body (Nordberg et al., 2004).

toxin
Poisonous substance produced by a biological organism such as a microbe, animal or plant.

traceability
Traceability is a term from metrology and is defined as the property of the result of a measurement or the value of a standard whereby it can be related to stated references, usually national or international standards, through an unbroken chain of comparisons all having stated uncertainties.

Source: International Vocabulary of Basic and General Terms in Metrology, International Standardization Organisation, Geneva, Switzerland, 2nd edition, 1993


tracer substance
Substance which can be tracked through one or more reactions or systems, often by detecting an incorporated isotope (isotope labeling).

transfer line
The interface of a hyphenated technique connecting the effluent from a gas-chromatograph with the inlet of an element detection system. In order to avoid losses by condensation etc. external heating is applied to the transfer line. 

transferrin
Transferrin is a glycoprotein with a relative mass of about 80,000 Da containing two high affinity binding sites. Plasma transferrin is involved in transporting iron from the alimentary tract to the tissues of the body. Its extremely high binding affinity (1022 dm3mol-1) means that it can also outcompete many microorganisms for iron, acting as a bacteriostat.

The two metal-binding sites on transferrin are similar but not identical and function independently. In the absence of iron transferrin is capable of binding other metal ions such as aluminium, chromium, cobalt, copper, manganese, vanadium as well as plutonium and europium. Similar proteins are found in milk (lactoferrin) and eggs (ovotransferrin).


transient signal evaluation
Signals that are short in duration and changing with the measurement time, such as created by sample introduction systems like flow injection, electrothermal vaporization or laser ablation are called transient signals. In order to evaluate such transient signals, the signal evaluation routine should be able to precisely follow and record the time-dependent signal level, rather than to integrate the signal.

transition element
A transition element is an element whose atom has an incomplete d-sub-shell, or which gives rise to a cation or cations with an incomplete d-sub-shell. The First Transition Series of elements is Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu. The Second and Third Transition Series are similarly derived: these include the lanthanoids (lanthanides) and actinoids (actinides) respectively which are designated inner (or f) transition elements of their respective Periods in the Periodic Table.

transmethylation
Transfer of a methyl group from one compound to another. If the process is biologically mediated, it is also called biomethylation.

tributyltin
Tributyltin compounds are a group of organotin compounds containing the (C4H9)3Sn (TBT) moiety, such as tributyltin hydride or tributyltin oxide. They are the main active ingredients in certain biocides used to control a broad spectrum of organisms, and these compounds are being considered for inclusion in the Rotterdam Convention.

triethylaluminium
Triethylaluminium (TEAl) can be used as a precursor for aluminum oxide deposition using the MOCVD process ( Metal Organic Chemical Vapor Deposition ) and in support of semi-conductor manufacturing.
Formula: (C2H5)3Al
CAS Number : 97-93-8
Other names: Aluminium triethyl; TEA

triethylgallium
In semiconductor manufacturing, triethyl gallium (TEGa) is used in MOCVD to deposit GaAs or GaN layers.

(C2H5)3Ga ; Gallium triethyl
CAS Number : 1115-99-7

trimethylbismuthine
(CH3)3Bi  - trimethylbismuthine, a volatile metalalkyl compound, has been identified in a variety of anthropogenic gases, e.g. landfill gas and sewage sludge digester gas. Biomethylation of inorganic bismuth compounds is performed by different microorganisms, such as bacteria.

trimethylgallium
In semiconductor manufacturing, trimethyl gallium (TMGa) is used in OrganoMetallic Vapor Phase Epitaxy (MOCVD) for the deposition of epitaxial GaAs or GaN layers.
 
(CH3)3Ga ; Gallium trimethyl
CAS Number : 1445-79-0

trimethylsilane
(CH3)3-SiH ; Trimethylsilane
CAS Number : 993-07-7

trimethylsilanol
Trimethylsilanol has been the most abundant compound determined in waste composting gas samples, accompanied by several siloxanes.
IUPAC name: Trimethylhydroxysilane
Molecular formula: C3H10OSi
Molecular weight: 90.20

trimethylstibine
(CH3)3Sb  -   Trimethylstibine, also called trimethyl antimony, is generated through methylation from organic and an inorganic salt of antimony by microorganisms. The volatile metalloid compound has been identified in a variety of anthropogenic gases, e.g. landfill gas and sewage sludge digester gas.

trimethyselenonium ion
The organoselenium species trimethylselenonium has been reported to be a Se-metabolite in rat urine (especially at enhanced exposure). In urine of healthy humans this species has not been unambigously confirmed.

triple filament method
The triple filament method is a surface ionization method used for TIMS wherein 3 filaments are used. Two filaments are used to heat and vaporize the sample and 1 filament, at a very high temperature, is used to ionize the sample.

triple quadrupole
One of the most popular types of tandem MS instrument is the triple quadrupole mass spectrometer, invented at Michigan State University by Richard A. Yost (now a chemistry professor at the University of Florida, Gainesville) and chemistry professor Christie G. Enke (now at the University of New Mexico, Albuquerque). James D. Morrison of Latrobe University, Melbourne, Australia, helped Yost and Enke reduce the technique to practice.

triple quadrupole mass spectrometer
An MS/MS device created by connecting 3 quadrupole mass spectrometers in sequence. The first instrument is used for precursor ion selection, the second as a collision tube for CID or SID, and the third for detection of fragment ions created by dissociation of precursor ions. CID spectra of low-energy collisions can be obtained with this instrument.

trophic level
A group of organisms that occupy the same position in a food chain-

tryptic digest
A mixture formed by the hydrolysis of a peptide or protein, or a mixture of these, using the enzyme trypsin. Cleavage of the peptide chain occurs on the C-terminal side of arginine and lysine residues to give a series of peptides which can be identified  by sequencing or mass mapping to lead to identification of the original protein. The technique is used extensively in proteomics.

TS-FF-AAS
Thermospray flame furnace atomic absorption spectrometry: A type of atomic absorption spectrometry where the liquid sample is forced through a heated metal capillary tip before atomisation in a flame.

tunable plasma source
An ion source for mass spectrometry capable of producing either elemental or molecular information depending on the plasma power selected.










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